Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04488511_11225 | Not Available | Positive | 3747215 - 3750805 | 131251.0 |
| susd family protein | SAMN04488511_11226 | Not Available | Positive | 3750821 - 3752281 | 54681.8 |
| peroxiredoxin | SAMN04488511_11227 | Not Available | Positive | 3752387 - 3753589 | 45862.8 |
| disulphide bond corrector protein dsbc | SAMN04488511_11228 | Not Available | Positive | 3753597 - 3754046 | 17022.0 |
| peroxiredoxin | SAMN04488511_11229 | Not Available | Positive | 3754071 - 3755219 | 42089.4 |
| dna-binding transcriptional regulator, lysr family | SAMN04488511_11230 | Not Available | Negative | 3755452 - 3756336 | 33728.9 |
| trna (cmo5u34)-methyltransferase | SAMN04488511_11231 | Not Available | Positive | 3756428 - 3757150 | 26959.2 |
| hypothetical protein | SAMN04488511_11232 | Not Available | Negative | 3757259 - 3757495 | 8778.51 |
| c-terminal processing protease ctpa/prc, contains a pdz domain | SAMN04488511_11233 | Not Available | Positive | 3757686 - 3759095 | 51586.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488511_11234 | Not Available | Positive | 3759167 - 3759757 | 22993.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
