Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph2:quinone reductase | SAMN04488511_101302 | Not Available | Positive | 374177 - 375190 | 36969.6 |
| response regulator receiver domain-containing protein | SAMN04488511_101303 | Not Available | Negative | 375260 - 375649 | 14797.7 |
| transcriptional regulator, deor family | SAMN04488511_101304 | Not Available | Negative | 375692 - 376456 | 27854.0 |
| glycerol-3-phosphate dehydrogenase | SAMN04488511_101305 | Not Available | Positive | 376618 - 378186 | 57335.1 |
| glycerol kinase | SAMN04488511_101306 | Not Available | Positive | 378218 - 379714 | 54615.5 |
| glycerol uptake facilitator protein | SAMN04488511_101307 | Not Available | Positive | 379919 - 380662 | 25822.9 |
| dna polymerase-3 subunit epsilon | SAMN04488511_101308 | Not Available | Positive | 380871 - 381548 | 26845.3 |
| cbs domain-containing protein | SAMN04488511_101309 | Not Available | Positive | 381538 - 382989 | 55354.9 |
| lsu ribosomal protein l20p | SAMN04488511_101310 | Not Available | Negative | 383223 - 383567 | 12995.0 |
| large subunit ribosomal protein l35 | SAMN04488511_101311 | Not Available | Negative | 383641 - 383841 | 7255.12 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
