Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxygen-independent coproporphyrinogen-3 oxidase | SAMN04488511_101292 | Not Available | Negative | 361965 - 363311 | 51247.3 |
| d-lactate dehydrogenase | SAMN04488511_101293 | Not Available | Negative | 363313 - 363738 | 15266.4 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488511_101294 | Not Available | Negative | 364380 - 365411 | 38495.3 |
| pas domain s-box-containing protein | SAMN04488511_101295 | Not Available | Negative | 365421 - 366623 | 45300.4 |
| hypothetical protein | SAMN04488511_101296 | Not Available | Negative | 366678 - 368459 | 67437.6 |
| nucleotide-binding universal stress protein, uspa family | SAMN04488511_101297 | Not Available | Negative | 368763 - 369635 | 32600.9 |
| l,d-transpeptidase catalytic domain | SAMN04488511_101298 | Not Available | Negative | 369738 - 371195 | 56221.2 |
| hypothetical protein | SAMN04488511_101299 | Not Available | Negative | 371304 - 372026 | 27217.2 |
| hypothetical protein | SAMN04488511_101300 | Not Available | Positive | 372136 - 372516 | 15049.1 |
| nramp (natural resistance-associated macrophage protein) metal ion transporters | SAMN04488511_101301 | Not Available | Positive | 372542 - 373852 | 47511.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
