Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488511_11173 | Not Available | Positive | 3561832 - 3562509 | 25742.9 |
| ferritin-like metal-binding protein ycie | SAMN04488511_11174 | Not Available | Positive | 3562624 - 3563181 | 20315.1 |
| hypothetical protein | SAMN04488511_11175 | Not Available | Positive | 3563427 - 3563900 | 16785.4 |
| hypothetical protein | SAMN04488511_11176 | Not Available | Negative | 3563897 - 3564505 | 22567.9 |
| rieske | SAMN04488511_11177 | Not Available | Positive | 3564684 - 3566252 | 57803.4 |
| hypothetical protein | SAMN04488511_11178 | Not Available | Positive | 3566308 - 3566604 | 11098.1 |
| uncharacterized conserved protein yece, duf72 family | SAMN04488511_11179 | Not Available | Positive | 3566657 - 3567382 | 28315.6 |
| response regulator receiver domain-containing protein | SAMN04488511_11180 | Not Available | Negative | 3567587 - 3567949 | 13340.2 |
| pas domain s-box-containing protein | SAMN04488511_11181 | Not Available | Negative | 3567942 - 3569429 | 56320.6 |
| signal transduction histidine kinase | SAMN04488511_11182 | Not Available | Negative | 3569884 - 3572811 | 108267.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
