Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488511_11123 | Not Available | Negative | 3500548 - 3501132 | 22483.3 |
| glycosyl hydrolases family 2, tim barrel domain | SAMN04488511_11124 | Not Available | Negative | 3501227 - 3503071 | 69285.8 |
| atp-binding cassette, subfamily b | SAMN04488511_11125 | Not Available | Negative | 3503182 - 3504951 | 66702.6 |
| trna pseudouridine38-40 synthase | SAMN04488511_11126 | Not Available | Negative | 3505080 - 3505805 | 27079.5 |
| protein of unknown function | SAMN04488511_11127 | Not Available | Positive | 3506092 - 3506502 | 15118.9 |
| protein of unknown function | SAMN04488511_11128 | Not Available | Positive | 3506519 - 3507079 | 21699.6 |
| hypothetical protein | SAMN04488511_11129 | Not Available | Positive | 3507087 - 3507548 | 18058.7 |
| hypothetical protein | SAMN04488511_11130 | Not Available | Positive | 3507600 - 3507968 | 14528.6 |
| atp-dependent rna helicase dead | SAMN04488511_11131 | Not Available | Positive | 3508220 - 3510106 | 69661.6 |
| hypothetical protein | SAMN04488511_11132 | Not Available | Positive | 3510100 - 3510321 | 8541.61 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
