Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannose-6-phosphate isomerase, cupin superfamily | SAMN04488511_11113 | Not Available | Positive | 3487417 - 3487848 | 15735.0 |
| hypothetical protein | SAMN04488511_11114 | Not Available | Positive | 3487845 - 3487994 | 5566.97 |
| 23s rrna m(6)a-1618 methyltransferase | SAMN04488511_11115 | Not Available | Negative | 3488020 - 3488988 | 36713.7 |
| aerobic c4-dicarboxylate transport protein | SAMN04488511_11116 | Not Available | Negative | 3489936 - 3491204 | 45483.3 |
| cyanophycinase | SAMN04488511_11117 | Not Available | Negative | 3491375 - 3492214 | 30546.4 |
| beta-aspartyl-peptidase (threonine type) | SAMN04488511_11118 | Not Available | Negative | 3492214 - 3493239 | 36106.6 |
| cyanophycinase | SAMN04488511_11119 | Not Available | Negative | 3493245 - 3494372 | 40373.8 |
| starch-binding associating with outer membrane | SAMN04488511_11120 | Not Available | Negative | 3494392 - 3495783 | 50621.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488511_11121 | Not Available | Negative | 3495795 - 3499199 | 124886.0 |
| fecr family protein | SAMN04488511_11122 | Not Available | Negative | 3499276 - 3500451 | 43831.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
