Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase family m23 | SAMN04488511_110213 | Not Available | Negative | 3460959 - 3461645 | 25869.3 |
| hemolysin iii | SAMN04488511_110214 | Not Available | Negative | 3461652 - 3462281 | 23979.0 |
| ribosome-binding factor a | SAMN04488511_110215 | Not Available | Negative | 3462287 - 3462664 | 14397.1 |
| four helix bundle protein | SAMN04488511_110216 | Not Available | Positive | 3462878 - 3463078 | 7445.71 |
| gtp-binding protein hflx | SAMN04488511_110217 | Not Available | Negative | 3463341 - 3464531 | 45005.2 |
| indole-3-glycerol phosphate synthase | SAMN04488511_110218 | Not Available | Negative | 3464622 - 3465404 | 28684.4 |
| anthranilate synthase component 2 | SAMN04488511_110219 | Not Available | Negative | 3465611 - 3466225 | 22821.2 |
| anthranilate synthase component 1 | SAMN04488511_110220 | Not Available | Negative | 3466271 - 3467668 | 53278.1 |
| agmatine deiminase | SAMN04488511_1111 | Not Available | Negative | 3468390 - 3469466 | 40419.5 |
| n-carbamoylputrescine amidase | SAMN04488511_1112 | Not Available | Negative | 3469694 - 3470569 | 33069.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
