Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold-shock dna-binding protein family | SAMN04488511_110193 | Not Available | Negative | 3437261 - 3437452 | 6916.1 |
| hypothetical protein | SAMN04488511_110194 | Not Available | Negative | 3437734 - 3438237 | 19411.2 |
| protein of unknown function | SAMN04488511_110195 | Not Available | Positive | 3438673 - 3439017 | 12835.3 |
| serine protease, s1-c subfamily, contains c-terminal pdz domain | SAMN04488511_110196 | Not Available | Negative | 3439076 - 3440626 | 53986.3 |
| diaminopimelate epimerase | SAMN04488511_110197 | Not Available | Positive | 3440933 - 3441715 | 29198.5 |
| membrane fusion protein, multidrug efflux system | SAMN04488511_110198 | Not Available | Positive | 3442132 - 3443304 | 41840.1 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN04488511_110199 | Not Available | Positive | 3443353 - 3446535 | 114872.0 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN04488511_110200 | Not Available | Positive | 3446483 - 3447946 | 53836.2 |
| helicase conserved c-terminal domain-containing protein | SAMN04488511_110201 | Not Available | Positive | 3448456 - 3451347 | 111678.0 |
| protein of unknown function | SAMN04488511_110202 | Not Available | Positive | 3451597 - 3451914 | 11560.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
