Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane receptor proteins, mostly fe transport | SAMN04488511_110173 | Not Available | Positive | 3416739 - 3419264 | 93370.9 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN04488511_110174 | Not Available | Positive | 3419336 - 3419911 | 21598.0 |
| rep element-mobilizing transposase rayt | SAMN04488511_110175 | Not Available | Positive | 3420344 - 3420805 | 18446.1 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | SAMN04488511_110176 | Not Available | Positive | 3420842 - 3421600 | 28723.6 |
| two component transcriptional regulator, lyttr family | SAMN04488511_110177 | Not Available | Negative | 3421852 - 3422601 | 28514.8 |
| histidine kinase | SAMN04488511_110178 | Not Available | Negative | 3422658 - 3423683 | 39332.4 |
| hypothetical protein | SAMN04488511_110179 | Not Available | Positive | 3424033 - 3424203 | 6117.82 |
| abc-2 type transport system atp-binding protein | SAMN04488511_110180 | Not Available | Positive | 3424209 - 3425117 | 33143.5 |
| hypothetical protein | SAMN04488511_110181 | Not Available | Positive | 3425119 - 3425916 | 30396.1 |
| regulatory protein, luxr family | SAMN04488511_110182 | Not Available | Negative | 3426042 - 3426272 | 8910.96 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
