Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxyl-terminal processing protease | SAMN04488511_110113 | Not Available | Positive | 3344750 - 3346354 | 59048.4 |
| l-histidine carboxy-lyase (histamine-forming) | SAMN04488511_110114 | Not Available | Positive | 3346507 - 3347640 | 41961.2 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488511_110115 | Not Available | Positive | 3347700 - 3348296 | 20920.5 |
| protein n-acetyltransferase, rimj/riml family | SAMN04488511_110116 | Not Available | Positive | 3348411 - 3348917 | 19478.3 |
| acetyltransferase (gnat) family protein | SAMN04488511_110117 | Not Available | Negative | 3349219 - 3349728 | 19709.7 |
| gtp-binding protein | SAMN04488511_110118 | Not Available | Negative | 3350007 - 3351428 | 53611.0 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488511_110119 | Not Available | Negative | 3351463 - 3351969 | 19057.3 |
| gtp-binding protein era | SAMN04488511_110120 | Not Available | Negative | 3351986 - 3352882 | 34094.4 |
| Trna-met | Not Available | Not Available | Positive | 3352996 - 3353071 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 3353139 - 3353210 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
