Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cubico group peptidase, beta-lactamase class c family | SAMN04488511_101272 | Not Available | Negative | 339946 - 341127 | 44858.7 |
| hypothetical protein | SAMN04488511_101273 | Not Available | Negative | 341296 - 342087 | 28974.5 |
| hypothetical protein | SAMN04488511_101274 | Not Available | Negative | 342113 - 342742 | 24506.8 |
| hypothetical protein | SAMN04488511_101275 | Not Available | Negative | 342753 - 343337 | 20951.1 |
| histidine kinase | SAMN04488511_101276 | Not Available | Positive | 343559 - 345562 | 77266.2 |
| two component transcriptional regulator, luxr family | SAMN04488511_101277 | Not Available | Positive | 345555 - 346184 | 23346.6 |
| hypothetical protein | SAMN04488511_101278 | Not Available | Positive | 346215 - 346751 | 20362.9 |
| nmra-like family protein | SAMN04488511_101279 | Not Available | Negative | 346809 - 347786 | 36645.1 |
| transcriptional regulator, hxlr family | SAMN04488511_101280 | Not Available | Positive | 347885 - 348259 | 13953.4 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04488511_101281 | Not Available | Negative | 348279 - 348971 | 26409.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
