Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein tyrosine phosphatase | SAMN04488511_11032 | Not Available | Positive | 3260531 - 3260953 | 15933.0 |
| hypothetical protein | SAMN04488511_11033 | Not Available | Positive | 3260923 - 3261765 | 32115.2 |
| hypothetical protein | SAMN04488511_11034 | Not Available | Negative | 3261839 - 3262246 | 16411.0 |
| hemolysin iii | SAMN04488511_11035 | Not Available | Negative | 3262236 - 3262925 | 26652.8 |
| alpha-l-fucosidase | SAMN04488511_11036 | Not Available | Positive | 3263048 - 3264541 | 55642.0 |
| membrane associated serine protease, rhomboid family | SAMN04488511_11037 | Not Available | Negative | 3264543 - 3265835 | 49207.8 |
| methyltransferase domain-containing protein | SAMN04488511_11038 | Not Available | Negative | 3266077 - 3266826 | 28660.6 |
| n-terminal domain of tricorn protease-containing protein | SAMN04488511_11039 | Not Available | Negative | 3266997 - 3270191 | 120975.0 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488511_11040 | Not Available | Positive | 3270318 - 3271598 | 48259.2 |
| predicted nuclease of restriction endonuclease-like (recb) superfamily, duf1016 family | SAMN04488511_11041 | Not Available | Positive | 3271719 - 3272810 | 42223.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
