Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488511_101262 | Not Available | Negative | 331118 - 331699 | 22140.4 |
| d-alanine-d-alanine ligase | SAMN04488511_101263 | Not Available | Negative | 331849 - 332835 | 36543.8 |
| pasta domain, binds beta-lactams | SAMN04488511_101264 | Not Available | Positive | 333036 - 333806 | 28043.1 |
| upf0755 protein | SAMN04488511_101265 | Not Available | Positive | 333826 - 334881 | 40166.5 |
| acyl-coa thioester hydrolase | SAMN04488511_101266 | Not Available | Positive | 334881 - 335288 | 15828.3 |
| membrane protein | SAMN04488511_101267 | Not Available | Positive | 335296 - 336285 | 37859.3 |
| Trna-ser | Not Available | Not Available | Positive | 336380 - 336464 | Not Available |
| trna(his)-5'-guanylyltransferase | SAMN04488511_101269 | Not Available | Positive | 336972 - 337709 | 28448.2 |
| hypothetical protein | SAMN04488511_101270 | Not Available | Negative | 337826 - 338617 | 30416.1 |
| metallo-beta-lactamase class b | SAMN04488511_101271 | Not Available | Negative | 339055 - 339921 | 32596.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
