Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate binding module (family 6) | SAMN04488511_109190 | Not Available | Negative | 3164842 - 3166593 | 66583.3 |
| glucosylceramidase | SAMN04488511_109191 | Not Available | Negative | 3166611 - 3168008 | 50901.1 |
| starch-binding associating with outer membrane | SAMN04488511_109192 | Not Available | Negative | 3168096 - 3169625 | 55807.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488511_109193 | Not Available | Negative | 3169636 - 3172755 | 113413.0 |
| y_y_y domain-containing protein | SAMN04488511_109194 | Not Available | Negative | 3173016 - 3175934 | 111226.0 |
| lysophospholipase l1 | SAMN04488511_109195 | Not Available | Negative | 3176666 - 3177325 | 25008.7 |
| hypothetical protein | SAMN04488511_109196 | Not Available | Positive | 3177513 - 3178229 | 26722.5 |
| uncharacterized membrane protein yccc | SAMN04488511_109197 | Not Available | Negative | 3179124 - 3181268 | 80661.5 |
| hypothetical protein | SAMN04488511_109198 | Not Available | Positive | 3181383 - 3182456 | 42220.9 |
| hypothetical protein | SAMN04488511_109199 | Not Available | Positive | 3182449 - 3183354 | 35373.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
