Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488511_109180 | Not Available | Positive | 3151821 - 3151958 | 5502.72 |
| rhomboid-like protein | SAMN04488511_109181 | Not Available | Positive | 3152013 - 3152744 | 27189.6 |
| membrane associated serine protease, rhomboid family | SAMN04488511_109182 | Not Available | Positive | 3152737 - 3153606 | 32322.2 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN04488511_109183 | Not Available | Positive | 3153606 - 3154718 | 42206.5 |
| nitroreductase | SAMN04488511_109184 | Not Available | Positive | 3155192 - 3155824 | 23341.2 |
| hypothetical protein | SAMN04488511_109185 | Not Available | Positive | 3156274 - 3159000 | 100179.0 |
| lactate dehydrogenase | SAMN04488511_109186 | Not Available | Negative | 3159393 - 3160352 | 35077.5 |
| protein of unknown function | SAMN04488511_109187 | Not Available | Negative | 3160395 - 3161201 | 30266.7 |
| tonb-dependent receptor plug domain | SAMN04488511_109188 | Not Available | Negative | 3161206 - 3163530 | 86727.3 |
| cytochrome c554 and c-prime | SAMN04488511_109189 | Not Available | Negative | 3163639 - 3164826 | 44169.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
