Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminopeptidase n | SAMN04488511_109159 | Not Available | Negative | 3124866 - 3126899 | 76309.4 |
| carboxypepd_reg-like domain-containing protein | SAMN04488511_109160 | Not Available | Negative | 3126944 - 3127684 | 27961.8 |
| transcriptional regulator, spx/mgsr family | SAMN04488511_109161 | Not Available | Negative | 3127753 - 3128100 | 13350.0 |
| histidine kinase | SAMN04488511_109162 | Not Available | Positive | 3128380 - 3129918 | 59459.1 |
| hypothetical protein | SAMN04488511_109163 | Not Available | Negative | 3129835 - 3130053 | 8285.21 |
| hypothetical protein | SAMN04488511_109164 | Not Available | Positive | 3130349 - 3130543 | 7704.51 |
| putative endonuclease | SAMN04488511_109165 | Not Available | Positive | 3130571 - 3130930 | 13991.6 |
| two component transcriptional regulator, lyttr family | SAMN04488511_109166 | Not Available | Positive | 3130927 - 3131601 | 25154.8 |
| carboxypepd_reg-like domain-containing protein | SAMN04488511_109167 | Not Available | Negative | 3131911 - 3138303 | 242246.0 |
| 6,7-dimethyl-8-ribityllumazine synthase | SAMN04488511_109168 | Not Available | Positive | 3138469 - 3138960 | 17262.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
