Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| choline dehydrogenase | SAMN04488511_109109 | Not Available | Positive | 3091597 - 3093333 | 63748.0 |
| gluconate 2-dehydrogenase subunit 3 | SAMN04488511_109110 | Not Available | Positive | 3093343 - 3093975 | 23452.0 |
| hypothetical protein | SAMN04488511_109111 | Not Available | Negative | 3094004 - 3094858 | 32151.6 |
| large subunit ribosomal protein l17 | SAMN04488511_109112 | Not Available | Negative | 3094945 - 3095466 | 19276.1 |
| dna-directed rna polymerase subunit alpha | SAMN04488511_109113 | Not Available | Negative | 3095571 - 3096563 | 37120.8 |
| small subunit ribosomal protein s4 | SAMN04488511_109114 | Not Available | Negative | 3096649 - 3097257 | 22904.6 |
| ssu ribosomal protein s11p | SAMN04488511_109115 | Not Available | Negative | 3097319 - 3097708 | 13786.8 |
| ssu ribosomal protein s13p | SAMN04488511_109116 | Not Available | Negative | 3097857 - 3098234 | 14180.4 |
| translation initiation factor if-1 | SAMN04488511_109117 | Not Available | Negative | 3098423 - 3098641 | 8322.27 |
| methionyl aminopeptidase | SAMN04488511_109118 | Not Available | Negative | 3098723 - 3099499 | 28216.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
