Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| muts domain v | SAMN04488511_10959 | Not Available | Negative | 3042013 - 3043830 | 68913.8 |
| 23s rrna (pseudouridine1915-n3)-methyltransferase | SAMN04488511_10960 | Not Available | Positive | 3043941 - 3044414 | 18080.1 |
| hypothetical protein | SAMN04488511_10961 | Not Available | Positive | 3044501 - 3044626 | 4944.16 |
| hypothetical protein | SAMN04488511_10962 | Not Available | Negative | 3044685 - 3045224 | 19092.1 |
| peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | SAMN04488511_10963 | Not Available | Negative | 3045376 - 3045837 | 16768.7 |
| hypothetical protein | SAMN04488511_10964 | Not Available | Positive | 3046068 - 3047249 | 44692.9 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04488511_10965 | Not Available | Positive | 3047532 - 3048272 | 25506.6 |
| putative porin | SAMN04488511_10966 | Not Available | Negative | 3048356 - 3050362 | 76801.3 |
| purine-nucleoside phosphorylase | SAMN04488511_10967 | Not Available | Negative | 3050364 - 3051179 | 30048.8 |
| lipid-a-disaccharide kinase | SAMN04488511_10968 | Not Available | Negative | 3051151 - 3052212 | 40547.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
