Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna (cytosine-5)-methyltransferase 1 | SAMN04488511_1099 | Not Available | Negative | 2982755 - 2984005 | 47205.9 |
| t/g mismatch-specific endonuclease | SAMN04488511_10910 | Not Available | Negative | 2984081 - 2984512 | 17038.8 |
| putative phage abortive infection protein | SAMN04488511_10911 | Not Available | Positive | 2984709 - 2985734 | 40480.3 |
| hnh endonuclease | SAMN04488511_10912 | Not Available | Positive | 2986044 - 2987111 | 41437.8 |
| hypothetical protein | SAMN04488511_10913 | Not Available | Positive | 2987820 - 2988383 | 19408.8 |
| glycosyl hydrolase family 76 | SAMN04488511_10914 | Not Available | Positive | 2989638 - 2990864 | 45500.2 |
| hypothetical protein | SAMN04488511_10915 | Not Available | Positive | 2991130 - 2991720 | 21505.9 |
| protein of unknown function | SAMN04488511_10916 | Not Available | Positive | 2992547 - 2993092 | 19909.1 |
| transcriptional regulator | SAMN04488511_10917 | Not Available | Positive | 2993097 - 2993306 | 7743.62 |
| excinuclease abc subunit a | SAMN04488511_10918 | Not Available | Positive | 2993877 - 2996381 | 90846.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
