Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4'-phosphopantetheinyl transferase superfamily protein | SAMN04488511_108254 | Not Available | Negative | 2966948 - 2967595 | 24889.1 |
| dctp deaminase | SAMN04488511_108255 | Not Available | Positive | 2967667 - 2968203 | 20076.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488511_1091 | Not Available | Negative | 2969237 - 2972099 | 104249.0 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488511_1092 | Not Available | Negative | 2972096 - 2973466 | 50204.0 |
| hypothetical protein | SAMN04488511_1093 | Not Available | Negative | 2973837 - 2974136 | 11287.2 |
| helix-turn-helix domain-containing protein | SAMN04488511_1094 | Not Available | Positive | 2974909 - 2975142 | 8841.83 |
| hypothetical protein | SAMN04488511_1095 | Not Available | Positive | 2975341 - 2975952 | 23530.5 |
| putative phage abortive infection protein | SAMN04488511_1096 | Not Available | Positive | 2975964 - 2977220 | 49256.6 |
| protein kinase domain-containing protein | SAMN04488511_1097 | Not Available | Positive | 2977217 - 2980894 | 139671.0 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN04488511_1098 | Not Available | Positive | 2980878 - 2982743 | 72429.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
