Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron complex outermembrane recepter protein | SAMN04488511_108234 | Not Available | Negative | 2945397 - 2947715 | 85149.5 |
| hypothetical protein | SAMN04488511_108235 | Not Available | Negative | 2947827 - 2948114 | 10911.3 |
| outer membrane protein tolc | SAMN04488511_108236 | Not Available | Negative | 2949457 - 2950908 | 56362.1 |
| multidrug resistance efflux pump | SAMN04488511_108237 | Not Available | Negative | 2950847 - 2952154 | 49098.0 |
| abc-type bacteriocin/lantibiotic exporter, contains an n-terminal double-glycine peptidase domain | SAMN04488511_108238 | Not Available | Negative | 2952166 - 2953833 | 62203.7 |
| transcriptional regulator, tetr family | SAMN04488511_108239 | Not Available | Negative | 2953833 - 2954582 | 29203.2 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488511_108240 | Not Available | Positive | 2954880 - 2955452 | 21759.7 |
| hypothetical protein | SAMN04488511_108241 | Not Available | Positive | 2955474 - 2956628 | 45355.3 |
| rep element-mobilizing transposase rayt | SAMN04488511_108242 | Not Available | Positive | 2956854 - 2957375 | 21024.2 |
| uncharacterized conserved protein, duf58 family, contains vwf domain | SAMN04488511_108243 | Not Available | Negative | 2957451 - 2958797 | 51572.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
