Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component transcriptional regulator, lyttr family | SAMN04488511_108214 | Not Available | Positive | 2925300 - 2926043 | 27973.2 |
| histidyl-trna synthetase | SAMN04488511_108215 | Not Available | Positive | 2926117 - 2927649 | 57257.1 |
| methyltransferase domain-containing protein | SAMN04488511_108216 | Not Available | Negative | 2927783 - 2928514 | 28324.6 |
| mfs transporter, mhs family, alpha-ketoglutarate permease | SAMN04488511_108217 | Not Available | Positive | 2928703 - 2930001 | 47659.9 |
| putative atpase | SAMN04488511_108218 | Not Available | Positive | 2930293 - 2931573 | 47190.9 |
| hypothetical protein | SAMN04488511_108219 | Not Available | Positive | 2931640 - 2933112 | 56421.3 |
| abc-2 type transport system atp-binding protein | SAMN04488511_108220 | Not Available | Positive | 2933115 - 2933807 | 25716.8 |
| outer membrane protein ompa | SAMN04488511_108221 | Not Available | Positive | 2933985 - 2934662 | 23081.7 |
| hypothetical protein | SAMN04488511_108222 | Not Available | Negative | 2935220 - 2935570 | 13672.8 |
| predicted dehydrogenase | SAMN04488511_108223 | Not Available | Positive | 2935676 - 2936713 | 38610.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
