Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gene 25-like lysozyme | SAMN04488511_108171 | Not Available | Negative | 2883828 - 2884262 | 16973.3 |
| hypothetical protein | SAMN04488511_108172 | Not Available | Positive | 2884442 - 2884963 | 20186.1 |
| hypothetical protein | SAMN04488511_108173 | Not Available | Positive | 2884974 - 2885459 | 19152.9 |
| pkd domain-containing protein | SAMN04488511_108174 | Not Available | Positive | 2885494 - 2886477 | 36411.3 |
| hypothetical protein | SAMN04488511_108175 | Not Available | Positive | 2886519 - 2888894 | 88620.2 |
| atp-dependent clp protease atp-binding subunit clpa | SAMN04488511_108176 | Not Available | Positive | 2888900 - 2891386 | 92596.4 |
| hypothetical protein | SAMN04488511_108177 | Not Available | Positive | 2891473 - 2891919 | 16789.8 |
| hypothetical protein | SAMN04488511_108178 | Not Available | Positive | 2891938 - 2893326 | 52570.4 |
| putative nadph-quinone reductase (modulator of drug activity b) | SAMN04488511_108179 | Not Available | Positive | 2893450 - 2894022 | 21639.2 |
| hypothetical protein | SAMN04488511_108180 | Not Available | Positive | 2894362 - 2894757 | 14695.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
