Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative peptide modification target, tigr04139 family | SAMN04488511_108161 | Not Available | Positive | 2874275 - 2874487 | 8022.55 |
| protein of unknown function | SAMN04488511_108162 | Not Available | Positive | 2874873 - 2875994 | 42824.7 |
| Trna-asp | Not Available | Not Available | Positive | 2876269 - 2876345 | Not Available |
| hypothetical protein | SAMN04488511_108164 | Not Available | Negative | 2876500 - 2877024 | 19730.4 |
| endo-1,4-beta-xylanase | SAMN04488511_108165 | Not Available | Negative | 2877148 - 2877915 | 27629.8 |
| hypothetical protein | SAMN04488511_108166 | Not Available | Positive | 2878135 - 2878557 | 14934.1 |
| hypothetical protein | SAMN04488511_108167 | Not Available | Negative | 2878642 - 2879781 | 43560.0 |
| hypothetical protein | SAMN04488511_108168 | Not Available | Negative | 2879801 - 2880694 | 34964.2 |
| type vi secretion, vasb, imph, vc_a0111 | SAMN04488511_108169 | Not Available | Positive | 2880812 - 2881750 | 35578.4 |
| hypothetical protein | SAMN04488511_108170 | Not Available | Negative | 2881935 - 2883800 | 71202.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
