Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04488511_108136 | Not Available | Positive | 2850523 - 2853624 | 112237.0 |
| starch-binding associating with outer membrane | SAMN04488511_108137 | Not Available | Positive | 2853642 - 2855231 | 59009.7 |
| protein of unknown function | SAMN04488511_108138 | Not Available | Positive | 2855239 - 2856024 | 28115.3 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04488511_108139 | Not Available | Negative | 2856260 - 2856862 | 21678.9 |
| hypothetical protein | SAMN04488511_108140 | Not Available | Positive | 2857110 - 2857325 | 8363.16 |
| alpha/beta hydrolase family protein | SAMN04488511_108141 | Not Available | Positive | 2857397 - 2858248 | 32558.1 |
| c-terminal processing peptidase-3. serine peptidase. merops family s41a | SAMN04488511_108142 | Not Available | Positive | 2858440 - 2860131 | 62176.5 |
| alpha-l-fucosidase | SAMN04488511_108143 | Not Available | Positive | 2860156 - 2861481 | 50680.6 |
| beta-galactosidase/beta-glucuronidase | SAMN04488511_108144 | Not Available | Positive | 2861803 - 2864409 | 98886.6 |
| hypothetical protein | SAMN04488511_108147 | Not Available | Negative | 2864819 - 2864974 | 5745.04 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
