Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488511_101221 | Not Available | Positive | 285942 - 286706 | 27067.6 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN04488511_101222 | Not Available | Positive | 286742 - 287596 | 30701.5 |
| l-fuconolactonase | SAMN04488511_101223 | Not Available | Positive | 287728 - 288549 | 32150.2 |
| l-lactate dehydrogenase (cytochrome) | SAMN04488511_101224 | Not Available | Positive | 288769 - 289938 | 43097.3 |
| aldose 1-epimerase | SAMN04488511_101225 | Not Available | Negative | 290270 - 291490 | 44188.4 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed/beta-phosphoglucomutase family hydrolase | SAMN04488511_101226 | Not Available | Positive | 291622 - 292293 | 24981.8 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN04488511_101227 | Not Available | Positive | 292296 - 292994 | 26875.6 |
| Trna-lys | Not Available | Not Available | Positive | 293203 - 293278 | Not Available |
| alpha-l-rhamnosidase | SAMN04488511_101229 | Not Available | Positive | 294101 - 296422 | 87620.9 |
| predicted phosphoesterase | SAMN04488511_101230 | Not Available | Positive | 296553 - 297299 | 28678.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
