Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine carboxypeptidase / d-alanyl-d-alanine-endopeptidase (penicillin-binding protein 4) | SAMN04488511_10851 | Not Available | Negative | 2761156 - 2762484 | 50351.7 |
| pdz domain-containing protein | SAMN04488511_10852 | Not Available | Positive | 2762536 - 2763783 | 46730.3 |
| protein of unknown function | SAMN04488511_10853 | Not Available | Positive | 2763875 - 2766391 | 93967.7 |
| exopolysaccharide biosynthesis protein | SAMN04488511_10854 | Not Available | Positive | 2766518 - 2767393 | 32726.2 |
| hypothetical protein | SAMN04488511_10855 | Not Available | Positive | 2767464 - 2768381 | 35174.2 |
| cold-shock dna-binding protein family | SAMN04488511_10856 | Not Available | Positive | 2768497 - 2768688 | 6928.29 |
| hypothetical protein | SAMN04488511_10857 | Not Available | Positive | 2768728 - 2769303 | 21332.3 |
| hypothetical protein | SAMN04488511_10858 | Not Available | Negative | 2769401 - 2769883 | 18232.2 |
| rna polymerase sigma factor, sigma-70 family | SAMN04488511_10859 | Not Available | Negative | 2769880 - 2770221 | 12957.6 |
| quaternary ammonium compound-resistance protein suge | SAMN04488511_10862 | Not Available | Negative | 2770655 - 2770975 | 11653.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
