Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase | SAMN04488511_10841 | Not Available | Negative | 2751195 - 2752271 | 38600.8 |
| hypothetical protein | SAMN04488511_10842 | Not Available | Negative | 2752394 - 2753494 | 41811.4 |
| response regulator receiver domain-containing protein | SAMN04488511_10843 | Not Available | Positive | 2753729 - 2755282 | 60586.6 |
| hypothetical protein | SAMN04488511_10844 | Not Available | Positive | 2755468 - 2755638 | 6251.76 |
| trna threonylcarbamoyladenosine biosynthesis protein tsae | SAMN04488511_10845 | Not Available | Positive | 2755835 - 2756251 | 15621.5 |
| alanine dehydrogenase | SAMN04488511_10846 | Not Available | Positive | 2756325 - 2757551 | 44512.2 |
| d-alanyl-d-alanine dipeptidase | SAMN04488511_10847 | Not Available | Positive | 2757626 - 2758309 | 26217.9 |
| histidine phosphatase superfamily (branch 1) | SAMN04488511_10848 | Not Available | Negative | 2758516 - 2759016 | 18687.5 |
| 7-keto-8-aminopelargonate synthetase | SAMN04488511_10849 | Not Available | Negative | 2759054 - 2760130 | 39452.3 |
| glycosyl hydrolases family 18 | SAMN04488511_10850 | Not Available | Negative | 2760102 - 2761127 | 37513.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
