Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aromatic ring-opening dioxygenase, catalytic subunit, ligb family | SAMN04488511_10821 | Not Available | Negative | 2736107 - 2736931 | 30547.6 |
| polyisoprenoid-binding protein ycei | SAMN04488511_10822 | Not Available | Negative | 2737026 - 2737598 | 20927.0 |
| helix-turn-helix domain-containing protein | SAMN04488511_10823 | Not Available | Negative | 2737821 - 2738381 | 20934.4 |
| protein of unknown function | SAMN04488511_10824 | Not Available | Negative | 2738381 - 2738884 | 18510.4 |
| hypothetical protein | SAMN04488511_10825 | Not Available | Negative | 2738972 - 2739784 | 30449.7 |
| copper chaperone copz | SAMN04488511_10826 | Not Available | Negative | 2739786 - 2740322 | 19261.3 |
| hypothetical protein | SAMN04488511_10827 | Not Available | Negative | 2740443 - 2740883 | 16482.6 |
| peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | SAMN04488511_10828 | Not Available | Positive | 2740939 - 2741661 | 27290.3 |
| hypothetical protein | SAMN04488511_10829 | Not Available | Negative | 2741654 - 2741920 | 10063.2 |
| exodeoxyribonuclease-3 | SAMN04488511_10830 | Not Available | Positive | 2741972 - 2742739 | 29465.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
