Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pkd domain-containing protein | SAMN04488511_107168 | Not Available | Positive | 2623398 - 2624231 | 31396.3 |
| protein of unknown function | SAMN04488511_107169 | Not Available | Positive | 2624427 - 2626901 | 92184.4 |
| thioredoxin | SAMN04488511_107170 | Not Available | Positive | 2627351 - 2627950 | 22388.1 |
| atp-dependent clp protease adaptor protein clps | SAMN04488511_107171 | Not Available | Negative | 2628133 - 2628414 | 10950.0 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | SAMN04488511_107172 | Not Available | Positive | 2628586 - 2629632 | 38199.5 |
| hypothetical protein | SAMN04488511_107173 | Not Available | Negative | 2629747 - 2632191 | 93842.3 |
| hypothetical protein | SAMN04488511_107174 | Not Available | Negative | 2632157 - 2633182 | 39852.6 |
| d-tyrosyl-trna(tyr) deacylase | SAMN04488511_107175 | Not Available | Positive | 2633212 - 2633664 | 16072.7 |
| dolichyl-phosphate-mannose-protein mannosyltransferase | SAMN04488511_107176 | Not Available | Positive | 2633758 - 2635299 | 59037.9 |
| ntp pyrophosphatase, house-cleaning of non-canonical ntps | SAMN04488511_107177 | Not Available | Positive | 2635289 - 2635615 | 12381.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
