Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar or nucleoside kinase, ribokinase family | SAMN04488511_107128 | Not Available | Positive | 2568481 - 2569401 | 33836.7 |
| predicted heme/steroid binding protein | SAMN04488511_107129 | Not Available | Negative | 2569538 - 2569780 | 9226.93 |
| lycopene cyclase domain-containing protein | SAMN04488511_107130 | Not Available | Negative | 2570254 - 2570943 | 27150.1 |
| hypothetical protein | SAMN04488511_107131 | Not Available | Negative | 2570945 - 2571475 | 19986.7 |
| phytoene desaturase | SAMN04488511_107132 | Not Available | Positive | 2572044 - 2573525 | 56432.9 |
| choline/glycine/proline betaine transport protein | SAMN04488511_107133 | Not Available | Negative | 2573899 - 2574171 | 10556.6 |
| choline/carnitine/betaine transport | SAMN04488511_107134 | Not Available | Negative | 2574219 - 2575406 | 44256.4 |
| bcct, betaine/carnitine/choline family transporter | SAMN04488511_107135 | Not Available | Negative | 2575476 - 2575913 | 16579.4 |
| voltage-gated potassium channel | SAMN04488511_107136 | Not Available | Negative | 2576007 - 2576819 | 30781.8 |
| sodium/proton antiporter, nhaa family | SAMN04488511_107137 | Not Available | Positive | 2576914 - 2578248 | 48264.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
