Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-rhamnosidase | SAMN04488511_101201 | Not Available | Negative | 243320 - 246058 | 103853.0 |
| beta-galactosidase/beta-glucuronidase | SAMN04488511_101202 | Not Available | Negative | 246184 - 248967 | 105517.0 |
| sialate o-acetylesterase | SAMN04488511_101203 | Not Available | Negative | 248967 - 250505 | 57375.3 |
| hypothetical protein | SAMN04488511_101204 | Not Available | Negative | 250502 - 252334 | 68597.0 |
| glycosyl hydrolases family 43 | SAMN04488511_101205 | Not Available | Negative | 252858 - 253799 | 35954.3 |
| putative collagen-binding domain of a collagenase | SAMN04488511_101206 | Not Available | Negative | 253987 - 255387 | 53377.2 |
| hypothetical protein | SAMN04488511_101207 | Not Available | Negative | 255390 - 258551 | 117014.0 |
| hypothetical protein | SAMN04488511_101208 | Not Available | Negative | 258759 - 260420 | 60795.2 |
| starch-binding associating with outer membrane | SAMN04488511_101209 | Not Available | Negative | 260822 - 262672 | 67129.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488511_101210 | Not Available | Negative | 262684 - 265953 | 118096.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
