Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein tolc | SAMN04488511_107118 | Not Available | Negative | 2562104 - 2563417 | 48569.0 |
| transcriptional regulator, tetr family | SAMN04488511_107119 | Not Available | Negative | 2563528 - 2564139 | 23587.8 |
| beta-carotene 3-hydroxylase | SAMN04488511_107120 | Not Available | Positive | 2564411 - 2564746 | 13213.1 |
| hypothetical protein | SAMN04488511_107121 | Not Available | Positive | 2564757 - 2565206 | 16793.2 |
| udp-n-acetylmuramate dehydrogenase | SAMN04488511_107122 | Not Available | Positive | 2565248 - 2566264 | 37265.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488511_107123 | Not Available | Positive | 2566392 - 2566922 | 20356.4 |
| hypothetical protein | SAMN04488511_107124 | Not Available | Negative | 2567085 - 2567387 | 11279.8 |
| giy-yig catalytic domain-containing protein | SAMN04488511_107125 | Not Available | Negative | 2567374 - 2567679 | 11854.5 |
| putative endonuclease | SAMN04488511_107126 | Not Available | Negative | 2567837 - 2568142 | 11967.7 |
| Trna-asn | Not Available | Not Available | Positive | 2568262 - 2568338 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
