Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent exodnase (exonuclease v) beta subunit (contains helicase and exonuclease domains) | SAMN04488511_10758 | Not Available | Negative | 2502206 - 2505424 | 122470.0 |
| very-short-patch-repair endonuclease | SAMN04488511_10759 | Not Available | Negative | 2505499 - 2506008 | 19459.8 |
| trna a37 threonylcarbamoyladenosine dehydratase | SAMN04488511_10760 | Not Available | Negative | 2506096 - 2506887 | 28630.2 |
| tatd dnase family protein | SAMN04488511_10761 | Not Available | Negative | 2506934 - 2507590 | 24818.6 |
| thioredoxin-like | SAMN04488511_10762 | Not Available | Positive | 2507845 - 2508372 | 19268.2 |
| hypothetical protein | SAMN04488511_10763 | Not Available | Negative | 2508471 - 2508680 | 7955.44 |
| protein of unknown function | SAMN04488511_10764 | Not Available | Negative | 2509004 - 2509537 | 19828.7 |
| hypothetical protein | SAMN04488511_10765 | Not Available | Negative | 2509642 - 2510070 | 14909.8 |
| hypothetical protein | SAMN04488511_10766 | Not Available | Negative | 2510100 - 2510261 | 5709.04 |
| tfox n-terminal domain-containing protein | SAMN04488511_10767 | Not Available | Negative | 2510350 - 2510688 | 12809.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
