Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyuridine 5'-triphosphate nucleotidohydrolase | SAMN04488511_10718 | Not Available | Positive | 2448741 - 2449223 | 17459.2 |
| flp pilus assembly protein tadd, contains tpr repeats | SAMN04488511_10719 | Not Available | Positive | 2449268 - 2450965 | 63938.2 |
| protein of unknown function | SAMN04488511_10720 | Not Available | Positive | 2450943 - 2451734 | 29390.9 |
| septal ring factor envc, activator of murein hydrolases amia and amib | SAMN04488511_10721 | Not Available | Positive | 2451910 - 2453205 | 48387.0 |
| sec-independent protein translocase protein tata | SAMN04488511_10722 | Not Available | Positive | 2453252 - 2453611 | 13243.7 |
| sec-independent protein translocase protein tata | SAMN04488511_10723 | Not Available | Positive | 2453622 - 2453822 | 7024.77 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit a | SAMN04488511_10724 | Not Available | Positive | 2453841 - 2455259 | 51445.6 |
| membrane-bound lytic murein transglycosylase d | SAMN04488511_10725 | Not Available | Positive | 2455469 - 2456872 | 52483.6 |
| allosteric nadp-dependent malic enzyme | SAMN04488511_10726 | Not Available | Positive | 2457115 - 2459436 | 84500.9 |
| holliday junction dna helicase subunit ruva | SAMN04488511_10727 | Not Available | Positive | 2459443 - 2460027 | 21353.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
