Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function duf58 | SAMN04488511_106285 | Not Available | Positive | 2429057 - 2429974 | 35537.5 |
| peroxiredoxin | SAMN04488511_106286 | Not Available | Positive | 2430042 - 2430503 | 17130.4 |
| thioredoxin | SAMN04488511_106287 | Not Available | Positive | 2430509 - 2431027 | 19353.3 |
| 23s rrna m(2)a-2503 methyltransferase | SAMN04488511_1071 | Not Available | Negative | 2432076 - 2433131 | 39455.2 |
| ribosomal large subunit pseudouridine synthase f | SAMN04488511_1072 | Not Available | Negative | 2433221 - 2434195 | 36168.5 |
| nad(p)h-dependent fmn reductase | SAMN04488511_1073 | Not Available | Negative | 2434223 - 2434744 | 18494.3 |
| uncharacterized damage-inducible protein dinb (forms a four-helix bundle) | SAMN04488511_1074 | Not Available | Negative | 2434865 - 2435425 | 21184.5 |
| hpt domain-containing protein | SAMN04488511_1075 | Not Available | Positive | 2435861 - 2438338 | 94184.2 |
| two-component system, ntrc family, response regulator hydg | SAMN04488511_1076 | Not Available | Negative | 2438339 - 2439697 | 50416.8 |
| hypothetical protein | SAMN04488511_1077 | Not Available | Negative | 2439740 - 2440051 | 11114.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
