Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate dehydrogenase (nad) | SAMN04488511_106275 | Not Available | Negative | 2416345 - 2417283 | 33176.5 |
| apolipoprotein d and lipocalin family protein | SAMN04488511_106276 | Not Available | Positive | 2417428 - 2417880 | 17906.2 |
| hypothetical protein | SAMN04488511_106277 | Not Available | Positive | 2417972 - 2418097 | 4568.62 |
| dna polymerase iii, alpha subunit | SAMN04488511_106278 | Not Available | Positive | 2418935 - 2423368 | 166910.0 |
| thioredoxin | SAMN04488511_106279 | Not Available | Positive | 2423525 - 2423845 | 11662.2 |
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN04488511_106280 | Not Available | Positive | 2423973 - 2425187 | 43880.4 |
| d-alanyl-d-alanine carboxypeptidase | SAMN04488511_106281 | Not Available | Positive | 2425740 - 2426459 | 27663.1 |
| hypothetical protein | SAMN04488511_106282 | Not Available | Positive | 2426449 - 2426979 | 19941.3 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488511_106283 | Not Available | Negative | 2427290 - 2427859 | 21737.1 |
| short-chain dehydrogenase | SAMN04488511_106284 | Not Available | Negative | 2427864 - 2428733 | 31442.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
