Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative n-acetylmuramidase | SAMN04488511_11511 | Not Available | Positive | 4321422 - 4321991 | 20697.3 |
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | Positive | 2 - 2305 | 18.01 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 133 - 244 | 18.01 |
| transposase | SAMN04488511_1011 | Not Available | Negative | 148 - 1674 | 58139.6 |
| major facilitator superfamily protein | SAMN04488511_1012 | Not Available | Positive | 1807 - 3039 | 44733.6 |
| coproporphyrinogen oxidase | SAMN04488511_1013 | Not Available | Positive | 3152 - 4066 | 35520.1 |
| endonuclease v | SAMN04488511_1014 | Not Available | Negative | 4163 - 4885 | 26612.2 |
| hypothetical protein | SAMN04488511_1015 | Not Available | Negative | 4928 - 5548 | 23917.5 |
| atp-dependent dna helicase recq | SAMN04488511_1016 | Not Available | Positive | 5687 - 10495 | 183928.0 |
| tetratricopeptide repeat-containing protein | SAMN04488511_1017 | Not Available | Negative | 10606 - 11727 | 42091.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
