Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosyl-atp pyrophosphohydrolase | SAMN04488511_106170 | Not Available | Positive | 2313311 - 2313778 | 17680.9 |
| alpha/beta hydrolase family protein | SAMN04488511_106171 | Not Available | Positive | 2313796 - 2314641 | 31947.6 |
| l-rhamnose-h+ transport protein | SAMN04488511_106172 | Not Available | Positive | 2314998 - 2316092 | 39891.5 |
| rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | SAMN04488511_106173 | Not Available | Positive | 2316114 - 2318234 | 76858.9 |
| l-rhamnose isomerase / sugar isomerase | SAMN04488511_106174 | Not Available | Positive | 2318437 - 2319717 | 47462.3 |
| sugar (pentulose or hexulose) kinase | SAMN04488511_106175 | Not Available | Positive | 2319730 - 2321115 | 51785.7 |
| substrate-binding protein-like domain-containing protein | SAMN04488511_106176 | Not Available | Positive | 2321158 - 2322189 | 39164.3 |
| hypothetical protein | SAMN04488511_106177 | Not Available | Positive | 2322282 - 2322524 | 9603.16 |
| helix-turn-helix | SAMN04488511_106178 | Not Available | Positive | 2322615 - 2322920 | 11531.8 |
| helicase conserved c-terminal domain-containing protein | SAMN04488511_106179 | Not Available | Positive | 2322945 - 2326331 | 130372.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
