Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type multidrug transport system, atpase and permease component | SAMN04488511_101171 | Not Available | Negative | 191400 - 193232 | 66926.0 |
| uncharacterized conserved protein, contains fist_n domain | SAMN04488511_101172 | Not Available | Positive | 193972 - 195111 | 41018.9 |
| pas domain s-box-containing protein | SAMN04488511_101173 | Not Available | Positive | 195098 - 198499 | 128235.0 |
| l-ribulokinase | SAMN04488511_101174 | Not Available | Positive | 198757 - 200457 | 61896.9 |
| l-ribulose 5-phosphate 4-epimerase | SAMN04488511_101175 | Not Available | Positive | 200454 - 201155 | 25751.6 |
| l-arabinose isomerase | SAMN04488511_101176 | Not Available | Positive | 201287 - 202780 | 55172.7 |
| l-fucose dehydrogenase | SAMN04488511_101177 | Not Available | Negative | 203149 - 203937 | 28348.0 |
| hypothetical protein | SAMN04488511_101178 | Not Available | Negative | 205119 - 207650 | 96640.2 |
| sialate o-acetylesterase | SAMN04488511_101179 | Not Available | Negative | 207656 - 209074 | 52254.7 |
| hypothetical protein | SAMN04488511_101180 | Not Available | Negative | 209244 - 211310 | 77156.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
