Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | SAMN04488511_105274 | Not Available | Positive | 2107015 - 2108073 | 41196.6 |
| cobalt-zinc-cadmium resistance protein czca | SAMN04488511_105275 | Not Available | Negative | 2108228 - 2111371 | 116305.0 |
| membrane fusion protein, cobalt-zinc-cadmium efflux system | SAMN04488511_105276 | Not Available | Negative | 2111400 - 2112488 | 39724.6 |
| outer membrane protein, cobalt-zinc-cadmium efflux system | SAMN04488511_105277 | Not Available | Negative | 2112499 - 2113767 | 48014.9 |
| signal transduction histidine kinase | SAMN04488511_105278 | Not Available | Negative | 2113920 - 2115296 | 52706.3 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04488511_105279 | Not Available | Negative | 2115297 - 2115974 | 25786.7 |
| dna-3-methyladenine glycosylase ii | SAMN04488511_105280 | Not Available | Positive | 2116164 - 2116793 | 24191.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488511_105281 | Not Available | Positive | 2117089 - 2117604 | 19157.3 |
| fecr family protein | SAMN04488511_105282 | Not Available | Positive | 2117668 - 2118612 | 34757.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488511_105283 | Not Available | Positive | 2118736 - 2122080 | 120995.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
