Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, hxlr family | SAMN04488511_105113 | Not Available | Positive | 1939022 - 1939474 | 17802.8 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04488511_105114 | Not Available | Negative | 1939621 - 1940358 | 27841.5 |
| two-component system, ompr family, phosphate regulon sensor histidine kinase phor | SAMN04488511_105115 | Not Available | Negative | 1940370 - 1941794 | 54569.3 |
| alpha-l-fucosidase | SAMN04488511_105116 | Not Available | Positive | 1942029 - 1943438 | 52966.3 |
| rna polymerase, sigma subunit, ecf family | SAMN04488511_105117 | Not Available | Negative | 1943505 - 1944014 | 19721.6 |
| hypothetical protein | SAMN04488511_105118 | Not Available | Positive | 1944186 - 1944305 | 4573.4 |
| pas domain s-box-containing protein | SAMN04488511_105119 | Not Available | Positive | 1944409 - 1946373 | 72819.5 |
| helix-turn-helix domain-containing protein | SAMN04488511_105120 | Not Available | Negative | 1946536 - 1947423 | 34141.0 |
| alpha-l-fucosidase | SAMN04488511_105121 | Not Available | Positive | 1947534 - 1949051 | 58046.8 |
| mfs transporter, fhs family, l-fucose permease | SAMN04488511_105122 | Not Available | Positive | 1949073 - 1950341 | 46268.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
