Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidinol dehydrogenase | SAMN04488511_10563 | Not Available | Negative | 1888581 - 1889861 | 45946.3 |
| atp phosphoribosyltransferase | SAMN04488511_10564 | Not Available | Negative | 1889911 - 1890762 | 30798.4 |
| l,d-transpeptidase catalytic domain | SAMN04488511_10565 | Not Available | Positive | 1891038 - 1892600 | 60280.8 |
| 8-oxo-dgtp diphosphatase | SAMN04488511_10566 | Not Available | Positive | 1892673 - 1893365 | 26571.0 |
| ribose-phosphate pyrophosphokinase | SAMN04488511_10567 | Not Available | Positive | 1893434 - 1894267 | 30178.6 |
| nucleoside 2-deoxyribosyltransferase like | SAMN04488511_10568 | Not Available | Positive | 1894274 - 1894759 | 18441.2 |
| adp-ribosylglycohydrolase | SAMN04488511_10569 | Not Available | Positive | 1894770 - 1895729 | 35371.6 |
| o-acetyl-adp-ribose deacetylase (regulator of rnase iii), contains macro domain | SAMN04488511_10570 | Not Available | Positive | 1895740 - 1896252 | 18480.3 |
| putative rna 2'-phosphotransferase | SAMN04488511_10571 | Not Available | Positive | 1896266 - 1896808 | 20581.7 |
| serine/threonine protein phosphatase 1 | SAMN04488511_10572 | Not Available | Positive | 1896810 - 1897541 | 28058.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
