Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotide-binding universal stress protein, uspa family | SAMN04488511_10553 | Not Available | Negative | 1879784 - 1880236 | 16250.4 |
| sh3 domain-containing protein | SAMN04488511_10554 | Not Available | Positive | 1880344 - 1881129 | 29657.1 |
| carboxypepd_reg-like domain-containing protein | SAMN04488511_10555 | Not Available | Positive | 1881170 - 1881892 | 27379.1 |
| wd domain-containing protein, g-beta repeat-containing protein | SAMN04488511_10556 | Not Available | Negative | 1881899 - 1882795 | 34157.9 |
| phosphoribosyl-atp pyrophosphatase /phosphoribosyl-amp cyclohydrolase | SAMN04488511_10557 | Not Available | Negative | 1882877 - 1883479 | 22714.2 |
| cyclase | SAMN04488511_10558 | Not Available | Negative | 1883541 - 1884737 | 43923.9 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | SAMN04488511_10559 | Not Available | Negative | 1884780 - 1885529 | 28028.0 |
| glutamine amidotransferase | SAMN04488511_10560 | Not Available | Negative | 1885531 - 1886124 | 21620.1 |
| imidazoleglycerol-phosphate dehydratase | SAMN04488511_10561 | Not Available | Negative | 1886307 - 1887440 | 42707.1 |
| histidinol-phosphate aminotransferase | SAMN04488511_10562 | Not Available | Negative | 1887442 - 1888482 | 38829.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
