Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c-type biogenesis protein ccmf | SAMN04488511_10532 | Not Available | Positive | 1862554 - 1865019 | 92634.7 |
| predicted oxidoreductase, contains short-chain dehydrogenase (sdr) and duf2520 domains | SAMN04488511_10533 | Not Available | Positive | 1865023 - 1865787 | 27955.8 |
| ferredoxin, 2fe-2s | SAMN04488511_10534 | Not Available | Positive | 1865828 - 1866160 | 12044.3 |
| fes assembly protein iscx | SAMN04488511_10535 | Not Available | Positive | 1866258 - 1866500 | 9808.27 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase) | SAMN04488511_10536 | Not Available | Positive | 1866578 - 1867105 | 19029.0 |
| nucleotide-binding universal stress protein, uspa family | SAMN04488511_10537 | Not Available | Positive | 1867278 - 1868108 | 30943.8 |
| hypothetical protein | SAMN04488511_10538 | Not Available | Positive | 1868209 - 1868598 | 14695.0 |
| septum formation protein | SAMN04488511_10539 | Not Available | Positive | 1868668 - 1869234 | 21045.4 |
| exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | SAMN04488511_10540 | Not Available | Negative | 1869494 - 1870408 | 33921.3 |
| uncharacterized conserved protein yece, duf72 family | SAMN04488511_10542 | Not Available | Negative | 1870655 - 1871368 | 28558.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
