Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxypyruvate isomerase | SAMN04488511_1051 | Not Available | Negative | 1828730 - 1829656 | 34631.3 |
| thiamine biosynthesis lipoprotein | SAMN04488511_1052 | Not Available | Negative | 1829677 - 1830672 | 36619.7 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN04488511_1053 | Not Available | Negative | 1830683 - 1832002 | 48976.1 |
| formylglycine-generating enzyme, required for sulfatase activity, contains sumf1/fge domain | SAMN04488511_1054 | Not Available | Negative | 1832039 - 1833004 | 36746.4 |
| protein of unknown function | SAMN04488511_1055 | Not Available | Negative | 1833644 - 1834921 | 49502.7 |
| atp-binding cassette, subfamily f, member 3 | SAMN04488511_1056 | Not Available | Negative | 1835283 - 1837241 | 74040.5 |
| transcriptional regulator, badm/rrf2 family | SAMN04488511_1057 | Not Available | Positive | 1837525 - 1837938 | 14942.0 |
| hypothetical protein | SAMN04488511_1058 | Not Available | Positive | 1838010 - 1838660 | 23102.4 |
| dihydroorotate oxidase a | SAMN04488511_1059 | Not Available | Positive | 1838865 - 1839962 | 41058.7 |
| hypothetical protein | SAMN04488511_10510 | Not Available | Negative | 1840290 - 1840460 | 6257.59 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
