Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488511_104188 | Not Available | Negative | 1802620 - 1802745 | 4962.1 |
| hypothetical protein | SAMN04488511_104189 | Not Available | Negative | 1802745 - 1802948 | 7462.16 |
| peptide/nickel transport system substrate-binding protein | SAMN04488511_104190 | Not Available | Negative | 1803052 - 1804686 | 62380.1 |
| hypothetical protein | SAMN04488511_104191 | Not Available | Positive | 1804733 - 1805185 | 16928.4 |
| dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domains | SAMN04488511_104192 | Not Available | Negative | 1805664 - 1806992 | 49185.7 |
| n-acetylglucosaminyl deacetylase, lmbe family | SAMN04488511_104193 | Not Available | Positive | 1807259 - 1809727 | 91632.2 |
| transporter, sss family | SAMN04488511_104194 | Not Available | Positive | 1809828 - 1811528 | 62846.3 |
| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase | SAMN04488511_104195 | Not Available | Positive | 1811607 - 1812230 | 23460.8 |
| protein of unknown function | SAMN04488511_104196 | Not Available | Positive | 1812501 - 1813019 | 18911.9 |
| putative alpha-1,2-mannosidase | SAMN04488511_104200 | Not Available | Positive | 1813898 - 1816027 | 80187.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
