Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tmrna,resume consensus sequence (at 89): tttagttggcgaaaatac | Not Available | Not Available | Positive | 1772260 - 1772624 | Not Available |
| transcriptional regulator, predicted component of viral defense system | SAMN04488511_104169 | Not Available | Positive | 1773205 - 1774014 | 30975.3 |
| nucleotidyl transferase abieii toxin, type iv ta system | SAMN04488511_104170 | Not Available | Positive | 1774011 - 1774595 | 22538.2 |
| hypothetical protein | SAMN04488511_104171 | Not Available | Positive | 1774592 - 1774789 | 7574.98 |
| catalase-peroxidase | SAMN04488511_104172 | Not Available | Positive | 1775165 - 1777444 | 82857.2 |
| hypothetical protein | SAMN04488511_104173 | Not Available | Positive | 1777972 - 1778700 | 29199.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488511_104174 | Not Available | Positive | 1779365 - 1782565 | 116605.0 |
| starch-binding associating with outer membrane | SAMN04488511_104175 | Not Available | Positive | 1782591 - 1784147 | 57329.9 |
| mannose-6-phosphate isomerase, type 2 | SAMN04488511_104176 | Not Available | Positive | 1784437 - 1784934 | 18913.1 |
| stearoyl-coa desaturase (delta-9 desaturase) | SAMN04488511_104177 | Not Available | Positive | 1785169 - 1785801 | 25308.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
