Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arabinoxylan arabinofuranohydrolase | SAMN04488511_104148 | Not Available | Negative | 1730140 - 1731525 | 51235.8 |
| beta-glucosidase | SAMN04488511_104149 | Not Available | Negative | 1731582 - 1734209 | 97329.0 |
| endo-1,4-beta-xylanase | SAMN04488511_104150 | Not Available | Negative | 1734416 - 1735504 | 42011.6 |
| endo-1,4-beta-xylanase | SAMN04488511_104151 | Not Available | Positive | 1735799 - 1736899 | 42706.0 |
| signal transduction histidine kinase | SAMN04488511_104152 | Not Available | Positive | 1737109 - 1741284 | 155974.0 |
| hypothetical protein | SAMN04488511_104153 | Not Available | Positive | 1741511 - 1741654 | 5307.35 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488511_104154 | Not Available | Positive | 1742369 - 1745443 | 113918.0 |
| starch-binding associating with outer membrane | SAMN04488511_104155 | Not Available | Positive | 1745454 - 1747337 | 71482.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488511_104156 | Not Available | Positive | 1747365 - 1750241 | 106985.0 |
| starch-binding associating with outer membrane | SAMN04488511_104157 | Not Available | Positive | 1750260 - 1752020 | 65229.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
