Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-galactosidase | SAMN04488511_104107 | Not Available | Positive | 1654925 - 1657390 | 91813.3 |
| hypothetical protein | SAMN04488511_104108 | Not Available | Positive | 1657463 - 1657675 | 7955.97 |
| hypothetical protein | SAMN04488511_104109 | Not Available | Negative | 1657697 - 1657996 | 11384.5 |
| protein of unknown function | SAMN04488511_104110 | Not Available | Negative | 1658416 - 1659084 | 24572.4 |
| protein of unknown function | SAMN04488511_104111 | Not Available | Negative | 1659177 - 1660379 | 44689.2 |
| starch-binding associating with outer membrane | SAMN04488511_104112 | Not Available | Negative | 1660413 - 1662386 | 75506.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488511_104113 | Not Available | Negative | 1662404 - 1665586 | 117862.0 |
| signal transduction histidine kinase | SAMN04488511_104114 | Not Available | Negative | 1666265 - 1670290 | 152348.0 |
| ricin-type beta-trefoil lectin domain-like | SAMN04488511_104115 | Not Available | Negative | 1671195 - 1672283 | 39037.4 |
| beta-xylosidase | SAMN04488511_104116 | Not Available | Positive | 1672980 - 1674923 | 73443.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
